11.7.2 Location LOD scores file identification statements

All Lodscore programs use the general MORGAN file identification statements (see File identification statements) and the Autozyg rescue file statements (see Autozyg file identification statements). One additional statement is optional for lm_bayes:

output Rao-Blackwellized estimates file

If this file is specified, the set of Rao-Blackwellized lod score estimates at each trait position is written at the frequency specified in the `compute scores' statement.