11.7.7 Location LOD scores computational parameters

• See ibddrop statements, for setting the sampler seeds.

• See Autozyg computational parameters, for specifying the marker data.

• See Autozyg computational parameters, for specifying the trait data as genotypic, quantitative or discrete and for specifying penetrances when trait data are discrete.

set pseudo-priors X1 X2 ...

This statment is optional for lm_bayes. The number of pseudo-priors is the number of trial trait positions plus one. The first pseudo-prior is for the unlinked position; this should be assigned a positive value. All other pseudo-priors must be positive or zero. The set of pseudo-priors need not be normalized.